We gratefully acknowledge support from
the Simons Foundation and member institutions.
Full-text links:

Download:

Current browse context:

eess.IV

Change to browse by:

References & Citations

Bookmark

(what is this?)
CiteULike logo BibSonomy logo Mendeley logo del.icio.us logo Digg logo Reddit logo

Electrical Engineering and Systems Science > Image and Video Processing

Title: SPLICE -- Streamlining Digital Pathology Image Processing

Abstract: Digital pathology and the integration of artificial intelligence (AI) models have revolutionized histopathology, opening new opportunities. With the increasing availability of Whole Slide Images (WSIs), there's a growing demand for efficient retrieval, processing, and analysis of relevant images from vast biomedical archives. However, processing WSIs presents challenges due to their large size and content complexity. Full computer digestion of WSIs is impractical, and processing all patches individually is prohibitively expensive. In this paper, we propose an unsupervised patching algorithm, Sequential Patching Lattice for Image Classification and Enquiry (SPLICE). This novel approach condenses a histopathology WSI into a compact set of representative patches, forming a "collage" of WSI while minimizing redundancy. SPLICE prioritizes patch quality and uniqueness by sequentially analyzing a WSI and selecting non-redundant representative features. We evaluated SPLICE for search and match applications, demonstrating improved accuracy, reduced computation time, and storage requirements compared to existing state-of-the-art methods. As an unsupervised method, SPLICE effectively reduces storage requirements for representing tissue images by 50%. This reduction enables numerous algorithms in computational pathology to operate much more efficiently, paving the way for accelerated adoption of digital pathology.
Comments: Under review for publication
Subjects: Image and Video Processing (eess.IV); Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG)
Cite as: arXiv:2404.17704 [eess.IV]
  (or arXiv:2404.17704v1 [eess.IV] for this version)

Submission history

From: Hamid Tizhoosh [view email]
[v1] Fri, 26 Apr 2024 21:30:36 GMT (16256kb,D)

Link back to: arXiv, form interface, contact.