Quantitative Biology

Authors and titles for Apr 2019, skipping first 225

[226]  arXiv:1904.11793 (cross-list from physics.soc-ph) [pdf, other]

Title: Geometric renormalization unravels self-similarity of the multiscale human connectome

Authors: Muhua Zheng, Antoine Allard, Patric Hagmann, Yasser Alemán-Gómez, M. Ángeles Serrano

Journal-ref: Proceedings of the National Academy of Sciences, 117(33), 20244-20253 (2020)

Subjects: Physics and Society (physics.soc-ph); Neurons and Cognition (q-bio.NC)

[227]  arXiv:1904.12161 (cross-list from math.DS) [pdf, other]

Title: The geometry of rest-spike bistability

Authors: Giuseppe Ilario Cirillo, Rodolphe Sepulchre

Comments: 19 pages, 8 figures

Subjects: Dynamical Systems (math.DS); Neurons and Cognition (q-bio.NC)

[228]  arXiv:1904.12206 (cross-list from cs.LG) [pdf, other]

Title: Temporal-Clustering Invariance in Irregular Healthcare Time Series

Authors: Mohammad Taha Bahadori, Zachary Chase Lipton

Subjects: Machine Learning (cs.LG); Quantitative Methods (q-bio.QM); Machine Learning (stat.ML)

[229]  arXiv:1904.12340 (cross-list from math.DS) [pdf, ps, other]

Title: Memory and mutualism in species sustainability: a time-fractional Lotka-Volterra model with harvesting

Authors: Mohammad M. Amirian, I.N.Towers, Z.Jovanoski, Andrew J. Irwin

Subjects: Dynamical Systems (math.DS); Populations and Evolution (q-bio.PE)

[230]  arXiv:1904.12432 (cross-list from math.CO) [pdf, other]

Title: Ranking top-k trees in tree-based phylogenetic networks

Authors: Momoko Hayamizu, Kazuhisa Makino

Comments: 6 pages, 1 figure

Subjects: Combinatorics (math.CO); Discrete Mathematics (cs.DM); Populations and Evolution (q-bio.PE)

[231]  arXiv:1904.12456 (cross-list from physics.bio-ph) [pdf, ps, other]

Title: A new method of brain stimulation at ultra-high frequency

Authors: Yousef Jamali, Mohammad Jamali, Mehdi Golshani

Subjects: Biological Physics (physics.bio-ph); Neurons and Cognition (q-bio.NC); Quantitative Methods (q-bio.QM)

[232]  arXiv:1904.12460 (cross-list from physics.bio-ph) [pdf, ps, other]

Title: Theory of cyborg: a new approach to fish locomotion control

Authors: Mohammad Jamali, Yousef Jamali, Mehdi Golshani

Subjects: Biological Physics (physics.bio-ph); Neurons and Cognition (q-bio.NC); Quantitative Methods (q-bio.QM)

[233]  arXiv:1904.12591 (cross-list from cs.DC) [pdf, other]

Title: Winner-Take-All Computation in Spiking Neural Networks

Authors: Nancy Lynch, Cameron Musco, Merav Parter

Subjects: Distributed, Parallel, and Cluster Computing (cs.DC); Disordered Systems and Neural Networks (cond-mat.dis-nn); Neural and Evolutionary Computing (cs.NE); Neurons and Cognition (q-bio.NC)

[234]  arXiv:1904.12690 (cross-list from cs.CV) [pdf, other]

Title: Capturing human categorization of natural images at scale by combining deep networks and cognitive models

Authors: Ruairidh M. Battleday, Joshua C. Peterson, Thomas L. Griffiths

Comments: 29 pages; 4 figures. arXiv admin note: text overlap with arXiv:1711.04855

Subjects: Computer Vision and Pattern Recognition (cs.CV); Artificial Intelligence (cs.AI); Machine Learning (cs.LG); Neurons and Cognition (q-bio.NC); Machine Learning (stat.ML)

[235]  arXiv:1904.12958 (cross-list from cs.AI) [pdf, ps, other]

Title: Predictive Situation Awareness for Ebola Virus Disease using a Collective Intelligence Multi-Model Integration Platform: Bayes Cloud

Authors: Cheol Young Park, Shou Matsumoto, Jubyung Ha, YoungWon Park

Subjects: Artificial Intelligence (cs.AI); Physics and Society (physics.soc-ph); Populations and Evolution (q-bio.PE)

[236]  arXiv:1904.12972 (cross-list from physics.soc-ph) [pdf, other]

Title: Epistasis between cultural traits drives paradigm shifts in cultural evolution

Authors: Ignacio Pascual, Jacobo Aguirre, Susanna Manrubia, José A. Cuesta

Comments: 12 pages, 6 figures, uses SelfArxone.cls

Journal-ref: Royal Society Open Science 7, 191813 (2020)

Subjects: Physics and Society (physics.soc-ph); Populations and Evolution (q-bio.PE)

[237]  arXiv:1904.13009 (cross-list from physics.bio-ph) [pdf, ps, other]

Title: Collective dynamics and self-organization of active particles on random networks

Authors: Hanqing Nan, Yu Zheng, Shaohua Chen, Christopher Eddy, Jianxiang Tian, Wenxiang Xu, Bo Sun, Yang Jiao

Comments: 5 pages, 4 figures

Subjects: Biological Physics (physics.bio-ph); Soft Condensed Matter (cond-mat.soft); Cell Behavior (q-bio.CB)

[238]  arXiv:1904.13052 (cross-list from cond-mat.dis-nn) [pdf, other]

Title: Minimal model of permutation symmetry in unsupervised learning

Authors: Tianqi Hou, K.Y. Michael Wong, Haiping Huang

Comments: 36 pages, 110 equations, 5 figures; a complete picture about physical laws of unsupervised learning in neural networks presented

Journal-ref: 2019 J. Phys. A: Math. Theor. 52 414001

Subjects: Disordered Systems and Neural Networks (cond-mat.dis-nn); Statistical Mechanics (cond-mat.stat-mech); Machine Learning (cs.LG); Neurons and Cognition (q-bio.NC); Machine Learning (stat.ML)

[239]  arXiv:1904.05773 (cross-list from eess.IV) [pdf, other]

Title: Diagnosis of Celiac Disease and Environmental Enteropathy on Biopsy Images Using Color Balancing on Convolutional Neural Networks

Authors: Kamran Kowsari, Rasoul Sali, Marium N. Khan, William Adorno, S. Asad Ali, Sean R. Moore, Beatrice C. Amadi, Paul Kelly, Sana Syed, Donald E. Brown

Subjects: Image and Video Processing (eess.IV); Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG); Quantitative Methods (q-bio.QM); Machine Learning (stat.ML)