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Quantitative Biology

Authors and titles for recent submissions, skipping first 11

[ total of 94 entries: 1-25 | 12-36 | 37-61 | 62-86 | 87-94 ]
[ showing 25 entries per page: fewer | more | all ]

Fri, 17 May 2024 (continued, showing last 7 of 18 entries)

[12]  arXiv:2405.09647 [pdf, ps, other]
Title: Dynamics of antibody binding and neutralization during viral infection
Authors: Zhenying Chen, Hasan Ahmed, Cora Hirst, Rustom Antia
Subjects: Populations and Evolution (q-bio.PE); Biomolecules (q-bio.BM)
[13]  arXiv:2405.09595 [pdf, other]
Title: Simplicity within biological complexity
Authors: Natasa Przulj, Noel Malod-Dognin
Comments: 29 pages, 4 figures
Subjects: Other Quantitative Biology (q-bio.OT); Artificial Intelligence (cs.AI)
[14]  arXiv:2405.10183 (cross-list from cs.NE) [pdf, other]
Title: A Guide to Tracking Phylogenies in Parallel and Distributed Agent-based Evolution Models
Authors: Matthew Andres Moreno, Anika Ranjan, Emily Dolson, Luis Zaman
Subjects: Neural and Evolutionary Computing (cs.NE); Populations and Evolution (q-bio.PE)
[15]  arXiv:2405.09886 (cross-list from cs.LG) [pdf, ps, other]
Title: MTLComb: multi-task learning combining regression and classification tasks for joint feature selection
Authors: Han Cao, Sivanesan Rajan, Bianka Hahn, Ersoy Kocak, Daniel Durstewitz, Emanuel Schwarz, Verena Schneider-Lindner
Comments: 33 pages, 3 figures, 5 tables
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI); Biomolecules (q-bio.BM)
[16]  arXiv:2405.09851 (cross-list from eess.IV) [pdf, other]
Title: Region of Interest Detection in Melanocytic Skin Tumor Whole Slide Images -- Nevus & Melanoma
Authors: Yi Cui, Yao Li, Jayson R. Miedema, Sharon N. Edmiston, Sherif Farag, J.S. Marron, Nancy E. Thomas
Comments: 5 figures, NeurIPS 2022 Workshop
Subjects: Image and Video Processing (eess.IV); Computer Vision and Pattern Recognition (cs.CV); Quantitative Methods (q-bio.QM)
[17]  arXiv:2405.09756 (cross-list from cs.LG) [pdf, other]
Title: An Autoencoder and Generative Adversarial Networks Approach for Multi-Omics Data Imbalanced Class Handling and Classification
Authors: Ibrahim Al-Hurani, Abedalrhman Alkhateeb, Salama Ikki
Subjects: Machine Learning (cs.LG); Neural and Evolutionary Computing (cs.NE); Genomics (q-bio.GN)
[18]  arXiv:2405.09649 (cross-list from physics.bio-ph) [pdf, other]
Title: Challenges and opportunities for digital twins in precision medicine: a complex systems perspective
Authors: Manlio De Domenico, Luca Allegri, Guido Caldarelli, Valeria d'Andrea, Barbara Di Camillo, Luis M. Rocha, Jordan Rozum, Riccardo Sbarbati, Francesco Zambelli
Subjects: Biological Physics (physics.bio-ph); Adaptation and Self-Organizing Systems (nlin.AO); Quantitative Methods (q-bio.QM)

Thu, 16 May 2024

[19]  arXiv:2405.09413 [pdf, ps, other]
Title: Three Dimensional Spatial Cognition: Bees and Bats
Authors: Robert Worden
Comments: 22 pages; program can be downloaded from www.bayeslanguage.org/bb/BB.zip
Subjects: Neurons and Cognition (q-bio.NC)
[20]  arXiv:2405.09395 [pdf, other]
Title: Matching domain experts by training from scratch on domain knowledge
Authors: Xiaoliang Luo, Guangzhi Sun, Bradley C. Love
Subjects: Neurons and Cognition (q-bio.NC); Artificial Intelligence (cs.AI); Computation and Language (cs.CL)
[21]  arXiv:2405.09389 [pdf, ps, other]
Title: Phylotrack: C++ and Python libraries for in silico phylogenetic tracking
Authors: Emily Dolson, Santiago Rodriguez-Papa, Matthew Andres Moreno
Subjects: Populations and Evolution (q-bio.PE); Neural and Evolutionary Computing (cs.NE)
[22]  arXiv:2405.09327 [pdf, other]
Title: Leveraging graphical model techniques to study evolution on phylogenetic networks
Authors: Benjamin Teo, Paul Bastide, Cécile Ané
Subjects: Populations and Evolution (q-bio.PE); Computation (stat.CO)
[23]  arXiv:2405.09216 [pdf, ps, other]
Title: The Genomic Landscape of Oceania
Authors: Consuelo D. Quinto-Cortés, Carmina Barberena Jonas, Sofía Vieyra-Sánchez, Stephen Oppenheimer, Ram González-Buenfil, Kathryn Auckland, Kathryn Robson, Tom Parks, J. Víctor Moreno-Mayar, Javier Blanco-Portillo, Julian R. Homburger, Genevieve L. Wojcik, Alissa L. Severson, Jonathan S. Friedlaender, Francoise Friedlaender, Angela Allen, Stephen Allen, Mark Stoneking, Adrian V. S. Hill, George Aho, George Koki, William Pomat, Carlos D. Bustamante, Maude Phipps, Alexander J. Mentzer, Andrés Moreno-Estrada, Alexander G. Ioannidis
Subjects: Populations and Evolution (q-bio.PE)
[24]  arXiv:2405.08970 [pdf, ps, other]
Title: Impact of Hypoglycemia on Glucose Variability Over Time for Individuals with Open Source Automated Insulin Delivery Systems
Authors: Arsalan Shahid, Dana M. Lewis
Subjects: Quantitative Methods (q-bio.QM)
[25]  arXiv:2405.08849 [pdf, ps, other]
Title: Rooting of thornless blackberry cuttings as induced by the extract of white willow (Salix alba L.) shoots collected in different times
Authors: Kocher Omer Salih, Aram Akram Mohammed, Ibrahim Maaroof Noori
Subjects: Other Quantitative Biology (q-bio.OT)
[26]  arXiv:2405.08827 [pdf, ps, other]
Title: A Dynamical Systems Approach to Predicting Patient Outcome after Cardiac Arrest
Authors: Richard J Povinelli, Mathew Dupont
Comments: Computing in Cardiology, 2023
Subjects: Quantitative Methods (q-bio.QM); Dynamical Systems (math.DS)
[27]  arXiv:2405.08979 (cross-list from cs.LG) [pdf, other]
Title: drGAT: Attention-Guided Gene Assessment of Drug Response Utilizing a Drug-Cell-Gene Heterogeneous Network
Authors: Yoshitaka Inoue, Hunmin Lee, Tianfan Fu, Augustin Luna
Subjects: Machine Learning (cs.LG); Molecular Networks (q-bio.MN); Quantitative Methods (q-bio.QM)

Wed, 15 May 2024 (showing first 9 of 12 entries)

[28]  arXiv:2405.08735 [pdf, other]
Title: Competition in the nutrient-driven self-cycling fermentation process
Authors: Stacey R. Smith?, Tyler Meadows, Gail S.K. Wolkowicz
Comments: 17 pages, 2 figures
Subjects: Populations and Evolution (q-bio.PE); Dynamical Systems (math.DS)
[29]  arXiv:2405.08601 [pdf, ps, other]
Title: The Requirement for Cognition, in an Equation
Authors: Robert Worden
Comments: 12 pages
Subjects: Neurons and Cognition (q-bio.NC); Populations and Evolution (q-bio.PE)
[30]  arXiv:2405.08523 [pdf, other]
Title: How forest insect outbreaks depend on forest size and tree distribution: an individual-based model results
Authors: Janusz Uchmański
Subjects: Populations and Evolution (q-bio.PE); Probability (math.PR)
[31]  arXiv:2405.08397 [pdf, other]
Title: Self-supervised contrastive learning unveils cortical folding pattern linked to prematurity
Authors: Julien Laval (BAOBAB), Aymeric Gaudin (BAOBAB), Vincent Frouin (BAOBAB), Jessica Dubois (UNIACT), Andrea Gondova (UNIACT), Jean-François Mangin (BAOBAB), Joël Chavas (BAOBAB), Denis Rivière (BAOBAB)
Journal-ref: MIDL 2024, Jul 2024, Paris, France
Subjects: Neurons and Cognition (q-bio.NC)
[32]  arXiv:2405.08391 [pdf, ps, other]
Title: Cerebralization of mathematical quantities and physical features in neural science: a critical evaluation
Authors: Laurent Goffart (CGGG)
Subjects: Neurons and Cognition (q-bio.NC)
[33]  arXiv:2405.08409 (cross-list from nlin.AO) [pdf, ps, other]
Title: Bifurcation analysis of a two-neuron central pattern generator model for both oscillatory and convergent neuronal activities
Authors: Kotaro Muramatsu, Hiroshi Kori
Subjects: Adaptation and Self-Organizing Systems (nlin.AO); Neurons and Cognition (q-bio.NC)
[34]  arXiv:2405.08404 (cross-list from math.PR) [pdf, other]
Title: Genetic contribution of an advantaged mutant in the biparental Moran model -- finite selection
Authors: Camille Coron (INRAE), Yves Le Jan
Subjects: Probability (math.PR); Populations and Evolution (q-bio.PE)
[35]  arXiv:2405.08384 (cross-list from math.AP) [pdf, other]
Title: Group Dispersal Modelling revisited
Authors: Mario Ayala (BioSP, TUM), Jérôme Coville (BioSP), Samuel Soubeyrand (BioSP)
Subjects: Analysis of PDEs (math.AP); Probability (math.PR); Quantitative Methods (q-bio.QM)
[36]  arXiv:2405.08304 (cross-list from cs.CL) [pdf, other]
Title: Computational Thought Experiments for a More Rigorous Philosophy and Science of the Mind
Authors: Iris Oved, Nikhil Krishnaswamy, James Pustejovsky, Joshua Hartshorne
Comments: 6 pages, 4 figures, to appear at CogSci 2024
Subjects: Computation and Language (cs.CL); Artificial Intelligence (cs.AI); Neurons and Cognition (q-bio.NC)
[ total of 94 entries: 1-25 | 12-36 | 37-61 | 62-86 | 87-94 ]
[ showing 25 entries per page: fewer | more | all ]

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