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Quantitative Biology

Authors and titles for recent submissions, skipping first 12

[ total of 93 entries: 1-25 | 13-37 | 38-62 | 63-87 | 88-93 ]
[ showing 25 entries per page: fewer | more | all ]

Fri, 17 May 2024 (continued, showing last 17 of 18 entries)

[13]  arXiv:2405.10110 [pdf, other]
Title: Source identification using different moment hierarchies
Authors: Jan Friedrich, Sarah Schraven, Fabian Kiessling, Michael Herty
Subjects: Quantitative Methods (q-bio.QM); Optimization and Control (math.OC)
[14]  arXiv:2405.10078 [pdf, other]
Title: Spurious reconstruction from brain activity
Authors: Ken Shirakawa, Yoshihiro Nagano, Misato Tanaka, Shuntaro C. Aoki, Kei Majima, Yusuke Muraki, Yukiyasu Kamitani
Subjects: Neurons and Cognition (q-bio.NC)
[15]  arXiv:2405.10070 [pdf, other]
Title: HeMiTo-dynamics: a characterisation of mammalian prion toxicity using non-dimensionalisation, linear stability and perturbation analyses
Authors: Johannes G. Borgqvist, Christoffer Gretarsson Alexandersen
Comments: 25 pages and 4 figures
Subjects: Quantitative Methods (q-bio.QM)
[16]  arXiv:2405.10035 [pdf, ps, other]
Title: A quality control analysis of the resting state hypothesis via permutation entropy on EEG recordings
Authors: Alessio Perinelli, Leonardo Ricci
Comments: 17 pages, 6 figures. Submitted to: Chaos
Subjects: Neurons and Cognition (q-bio.NC)
[17]  arXiv:2405.09953 [pdf, ps, other]
Title: Zero-shot counting with a dual-stream neural network model
Authors: Jessica A.F. Thompson, Hannah Sheahan, Tsvetomira Dumbalska, Julian Sandbrink, Manuela Piazza, Christopher Summerfield
Subjects: Neurons and Cognition (q-bio.NC)
[18]  arXiv:2405.09813 [pdf, other]
Title: Revisiting the exclusion principle in epidemiology at its ultimate limit
Authors: Nir Gavish
Comments: 17 pages, 5 figures
Subjects: Populations and Evolution (q-bio.PE)
[19]  arXiv:2405.09809 [pdf, other]
Title: Biomarker Selection for Adaptive Systems
Authors: Joshua Pickard, Cooper Stansbury, Amit Surana, Anthony Bloch, Indika Rajapakse
Subjects: Molecular Networks (q-bio.MN); Optimization and Control (math.OC)
[20]  arXiv:2405.09748 [pdf, other]
Title: A Mathematical Reconstruction of Endothelial Cell Networks
Authors: Okezue Bell, Anthony Bell
Comments: 14 pages, 9 figures
Subjects: Cell Behavior (q-bio.CB); Combinatorics (math.CO); Group Theory (math.GR); Quantitative Methods (q-bio.QM)
[21]  arXiv:2405.09699 [pdf, ps, other]
Title: Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry
Authors: Prashant Kaushal, Manisha R. Ummadi, Gwendolyn M. Jang, Yennifer Delgado, Sara K. Makanani, Sophie F. Blanc, Decan M. Winters, Jiewei Xu, Benjamin Polacco, Yuan Zhou, Erica Stevenson, Manon Eckhardt, Lorena Zuliani-Alvarez, Robyn Kaake, Danielle L. Swaney, Nevan Krogan, Mehdi Bouhaddou
Comments: 29 pages, 3 figures
Subjects: Quantitative Methods (q-bio.QM); Molecular Networks (q-bio.MN)
[22]  arXiv:2405.09664 [pdf, other]
Title: Seasonality and susceptibility from measles time series
Authors: Niket Thakkar, Sonia Jindal, Katherine Rosenfeld
Subjects: Populations and Evolution (q-bio.PE)
[23]  arXiv:2405.09647 [pdf, ps, other]
Title: Dynamics of antibody binding and neutralization during viral infection
Authors: Zhenying Chen, Hasan Ahmed, Cora Hirst, Rustom Antia
Subjects: Populations and Evolution (q-bio.PE); Biomolecules (q-bio.BM)
[24]  arXiv:2405.09595 [pdf, other]
Title: Simplicity within biological complexity
Authors: Natasa Przulj, Noel Malod-Dognin
Comments: 29 pages, 4 figures
Subjects: Other Quantitative Biology (q-bio.OT); Artificial Intelligence (cs.AI)
[25]  arXiv:2405.10183 (cross-list from cs.NE) [pdf, other]
Title: A Guide to Tracking Phylogenies in Parallel and Distributed Agent-based Evolution Models
Authors: Matthew Andres Moreno, Anika Ranjan, Emily Dolson, Luis Zaman
Subjects: Neural and Evolutionary Computing (cs.NE); Populations and Evolution (q-bio.PE)
[26]  arXiv:2405.09886 (cross-list from cs.LG) [pdf, ps, other]
Title: MTLComb: multi-task learning combining regression and classification tasks for joint feature selection
Authors: Han Cao, Sivanesan Rajan, Bianka Hahn, Ersoy Kocak, Daniel Durstewitz, Emanuel Schwarz, Verena Schneider-Lindner
Comments: 33 pages, 3 figures, 5 tables
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI); Biomolecules (q-bio.BM)
[27]  arXiv:2405.09851 (cross-list from eess.IV) [pdf, other]
Title: Region of Interest Detection in Melanocytic Skin Tumor Whole Slide Images -- Nevus & Melanoma
Authors: Yi Cui, Yao Li, Jayson R. Miedema, Sharon N. Edmiston, Sherif Farag, J.S. Marron, Nancy E. Thomas
Comments: 5 figures, NeurIPS 2022 Workshop
Subjects: Image and Video Processing (eess.IV); Computer Vision and Pattern Recognition (cs.CV); Quantitative Methods (q-bio.QM)
[28]  arXiv:2405.09756 (cross-list from cs.LG) [pdf, other]
Title: An Autoencoder and Generative Adversarial Networks Approach for Multi-Omics Data Imbalanced Class Handling and Classification
Authors: Ibrahim Al-Hurani, Abedalrhman Alkhateeb, Salama Ikki
Subjects: Machine Learning (cs.LG); Neural and Evolutionary Computing (cs.NE); Genomics (q-bio.GN)
[29]  arXiv:2405.09649 (cross-list from physics.bio-ph) [pdf, other]
Title: Challenges and opportunities for digital twins in precision medicine: a complex systems perspective
Authors: Manlio De Domenico, Luca Allegri, Guido Caldarelli, Valeria d'Andrea, Barbara Di Camillo, Luis M. Rocha, Jordan Rozum, Riccardo Sbarbati, Francesco Zambelli
Subjects: Biological Physics (physics.bio-ph); Adaptation and Self-Organizing Systems (nlin.AO); Quantitative Methods (q-bio.QM)

Thu, 16 May 2024 (showing first 8 of 9 entries)

[30]  arXiv:2405.09413 [pdf, ps, other]
Title: Three Dimensional Spatial Cognition: Bees and Bats
Authors: Robert Worden
Comments: 22 pages; program can be downloaded from www.bayeslanguage.org/bb/BB.zip
Subjects: Neurons and Cognition (q-bio.NC)
[31]  arXiv:2405.09395 [pdf, other]
Title: Matching domain experts by training from scratch on domain knowledge
Authors: Xiaoliang Luo, Guangzhi Sun, Bradley C. Love
Subjects: Neurons and Cognition (q-bio.NC); Artificial Intelligence (cs.AI); Computation and Language (cs.CL)
[32]  arXiv:2405.09389 [pdf, ps, other]
Title: Phylotrack: C++ and Python libraries for in silico phylogenetic tracking
Authors: Emily Dolson, Santiago Rodriguez-Papa, Matthew Andres Moreno
Subjects: Populations and Evolution (q-bio.PE); Neural and Evolutionary Computing (cs.NE)
[33]  arXiv:2405.09327 [pdf, other]
Title: Leveraging graphical model techniques to study evolution on phylogenetic networks
Authors: Benjamin Teo, Paul Bastide, Cécile Ané
Subjects: Populations and Evolution (q-bio.PE); Computation (stat.CO)
[34]  arXiv:2405.09216 [pdf, ps, other]
Title: The Genomic Landscape of Oceania
Authors: Consuelo D. Quinto-Cortés, Carmina Barberena Jonas, Sofía Vieyra-Sánchez, Stephen Oppenheimer, Ram González-Buenfil, Kathryn Auckland, Kathryn Robson, Tom Parks, J. Víctor Moreno-Mayar, Javier Blanco-Portillo, Julian R. Homburger, Genevieve L. Wojcik, Alissa L. Severson, Jonathan S. Friedlaender, Francoise Friedlaender, Angela Allen, Stephen Allen, Mark Stoneking, Adrian V. S. Hill, George Aho, George Koki, William Pomat, Carlos D. Bustamante, Maude Phipps, Alexander J. Mentzer, Andrés Moreno-Estrada, Alexander G. Ioannidis
Subjects: Populations and Evolution (q-bio.PE)
[35]  arXiv:2405.08970 [pdf, ps, other]
Title: Impact of Hypoglycemia on Glucose Variability Over Time for Individuals with Open Source Automated Insulin Delivery Systems
Authors: Arsalan Shahid, Dana M. Lewis
Subjects: Quantitative Methods (q-bio.QM)
[36]  arXiv:2405.08849 [pdf, ps, other]
Title: Rooting of thornless blackberry cuttings as induced by the extract of white willow (Salix alba L.) shoots collected in different times
Authors: Kocher Omer Salih, Aram Akram Mohammed, Ibrahim Maaroof Noori
Subjects: Other Quantitative Biology (q-bio.OT)
[37]  arXiv:2405.08827 [pdf, ps, other]
Title: A Dynamical Systems Approach to Predicting Patient Outcome after Cardiac Arrest
Authors: Richard J Povinelli, Mathew Dupont
Comments: Computing in Cardiology, 2023
Subjects: Quantitative Methods (q-bio.QM); Dynamical Systems (math.DS)
[ total of 93 entries: 1-25 | 13-37 | 38-62 | 63-87 | 88-93 ]
[ showing 25 entries per page: fewer | more | all ]

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