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Quantitative Biology

Authors and titles for recent submissions, skipping first 30

[ total of 100 entries: 1-10 | 11-20 | 21-30 | 31-40 | 41-50 | 51-60 | 61-70 | ... | 91-100 ]
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Thu, 30 May 2024 (continued, showing last 3 of 22 entries)

[31]  arXiv:2405.18655 (cross-list from cs.LG) [pdf, other]
Title: CAVACHON: a hierarchical variational autoencoder to integrate multi-modal single-cell data
Authors: Ping-Han Hsieh, Ru-Xiu Hsiao, Katalin Ferenc, Anthony Mathelier, Rebekka Burkholz, Chien-Yu Chen, Geir Kjetil Sandve, Tatiana Belova, Marieke Lydia Kuijjer
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI); Genomics (q-bio.GN)
[32]  arXiv:2405.18605 (cross-list from cs.CL) [pdf, ps, other]
Title: BioBERT-based Deep Learning and Merged ChemProt-DrugProt for Enhanced Biomedical Relation Extraction
Authors: Bridget T. McInnes, Jiawei Tang, Darshini Mahendran, Mai H. Nguyen
Subjects: Computation and Language (cs.CL); Information Retrieval (cs.IR); Molecular Networks (q-bio.MN)
[33]  arXiv:2405.18507 (cross-list from cs.LG) [pdf, other]
Title: Injecting Hierarchical Biological Priors into Graph Neural Networks for Flow Cytometry Prediction
Authors: Fatemeh Nassajian Mojarrad, Lorenzo Bini, Thomas Matthes, Stéphane Marchand-Maillet
Comments: 14 pages, ICML Conference Workshop 2024. arXiv admin note: text overlap with arXiv:2402.18610
Subjects: Machine Learning (cs.LG); Artificial Intelligence (cs.AI); Quantitative Methods (q-bio.QM)

Wed, 29 May 2024 (showing first 7 of 20 entries)

[34]  arXiv:2405.18419 [pdf, other]
Title: Exploring the Evolution of Altruistic Punishment with a PDE Model of Cultural Multilevel Selection
Authors: Daniel B. Cooney
Comments: 78 pages, 16 figures
Subjects: Populations and Evolution (q-bio.PE); Physics and Society (physics.soc-ph)
[35]  arXiv:2405.18402 [pdf, other]
Title: Antigenic Cooperation in Viral Populations: Redistribution of Loads Among Altruistic Viruses and Maximal Load per Altruist
Authors: Leonid Bunimovich, Athulya Ram
Comments: 37 pages, 9 figures
Subjects: Populations and Evolution (q-bio.PE)
[36]  arXiv:2405.18343 [pdf, other]
Title: On in-silico estimation of left ventricular end-diastolic pressure from cardiac strains
Authors: Emilio A. Mendiola, Raza Rana Mehdi, Dipan J. Shah, Reza Avazmohammadi
Subjects: Tissues and Organs (q-bio.TO)
[37]  arXiv:2405.18329 [pdf, other]
Title: Spatial-temporal analysis of neural desynchronization in sleep-like states reveals critical dynamics
Authors: Davor Curic, Surjeet Singh, Mojtaba Nazari, Majid H. Mohajerani, Joern Davidsen
Journal-ref: Vol. 132, Iss. 21, 24 Phys. Rev. Lett. 132, 218403, Published 22 May 2024
Subjects: Neurons and Cognition (q-bio.NC); Statistical Mechanics (cond-mat.stat-mech)
[38]  arXiv:2405.18327 [pdf, ps, other]
Title: Histopathology Based AI Model Predicts Anti-Angiogenic Therapy Response in Renal Cancer Clinical Trial
Authors: Jay Jasti, Hua Zhong, Vandana Panwar, Vipul Jarmale, Jeffrey Miyata, Deyssy Carrillo, Alana Christie, Dinesh Rakheja, Zora Modrusan, Edward Ernest Kadel III, Niha Beig, Mahrukh Huseni, James Brugarolas, Payal Kapur, Satwik Rajaram
Comments: 19 pages, 4 Figures
Subjects: Quantitative Methods (q-bio.QM); Artificial Intelligence (cs.AI); Computer Vision and Pattern Recognition (cs.CV); Machine Learning (cs.LG)
[39]  arXiv:2405.17960 [pdf, other]
Title: Elementary Flux Modes as CRN Gears for Free Energy Transduction
Authors: Massimo Bilancioni, Massimiliano Esposito
Comments: 6 pages, 3 figures
Subjects: Molecular Networks (q-bio.MN); Statistical Mechanics (cond-mat.stat-mech)
[40]  arXiv:2405.17847 [pdf, other]
Title: Sparsification of Phylogenetic Covariance Matrices of $k$-Regular Trees
Authors: Sean S. Svihla, Manuel E. Lladser
Comments: 17 pages, 5 figures, final version to appear in the Proceedings of the 35th International Conference on Probabilistic, Combinatorial and Asymptotic Methods for the Analysis of Algorithms (AofA2024)
Subjects: Populations and Evolution (q-bio.PE); Discrete Mathematics (cs.DM); Combinatorics (math.CO); Probability (math.PR)
[ total of 100 entries: 1-10 | 11-20 | 21-30 | 31-40 | 41-50 | 51-60 | 61-70 | ... | 91-100 ]
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